Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
RPL39P62891 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
RPL39P62891 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.51□□□□□ -0.73
RPL39P62891 AL080243.2-201ENST00000418783 582 ntBASIC10.51□□□□□ -0.73
RPL39P62891 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.51□□□□□ -0.73
RPL39P62891 AL590627.1-203ENST00000421194 1026 ntBASIC10.51□□□□□ -0.73
RPL39P62891 HLA-K-203ENST00000430151 1046 ntBASIC10.51□□□□□ -0.73
RPL39P62891 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.51□□□□□ -0.73
RPL39P62891 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 MIR4453-201ENST00000584019 89 ntBASIC10.51□□□□□ -0.73
RPL39P62891 AC022145.2-201ENST00000598203 171 ntBASIC10.51□□□□□ -0.73
RPL39P62891 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC10.51□□□□□ -0.73
RPL39P62891 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 C20orf181-201ENST00000623918 480 ntBASIC10.51□□□□□ -0.73
RPL39P62891 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RPL39P62891 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC10.51□□□□□ -0.73
RPL39P62891 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RPL39P62891 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 CETN4P-206ENST00000642099 2168 ntBASIC10.5□□□□□ -0.73
RPL39P62891 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 WARS-203ENST00000358655 2466 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 AC083964.2-201ENST00000623988 2396 ntBASIC10.5□□□□□ -0.73
RPL39P62891 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 CD82-202ENST00000342935 967 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
RPL39P62891 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
RPL39P62891 MCCD1P2-201ENST00000423228 335 ntBASIC10.5□□□□□ -0.73
RPL39P62891 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 SPDYE14P-201ENST00000442619 822 ntBASIC10.5□□□□□ -0.73
RPL39P62891 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.5□□□□□ -0.73
RPL39P62891 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC10.5□□□□□ -0.73
RPL39P62891 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC10.5□□□□□ -0.73
RPL39P62891 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.5□□□□□ -0.73
RPL39P62891 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC10.5□□□□□ -0.73
RPL39P62891 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
RPL39P62891 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
RPL39P62891 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms