Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CARS-214ENST00000529772 2637 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VBP1P61758 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
VBP1P61758 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
VBP1P61758 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.3□□□□□ -0.28
VBP1P61758 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.3□□□□□ -0.28
VBP1P61758 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.3□□□□□ -0.28
VBP1P61758 SLED1-202ENST00000512051 380 ntBASIC13.3□□□□□ -0.28
VBP1P61758 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 RARRES2P8-201ENST00000566335 367 ntBASIC13.3□□□□□ -0.28
VBP1P61758 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
VBP1P61758 BCAR1-209ENST00000546196 1340 ntBASIC13.3□□□□□ -0.28
VBP1P61758 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.3□□□□□ -0.28
VBP1P61758 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 FP325330.2-201ENST00000624219 5630 ntBASIC13.3□□□□□ -0.28
VBP1P61758 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
VBP1P61758 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.3□□□□□ -0.28
VBP1P61758 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
VBP1P61758 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VBP1P61758 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VBP1P61758 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
VBP1P61758 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.29□□□□□ -0.28
VBP1P61758 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.29□□□□□ -0.28
VBP1P61758 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 AC092910.1-201ENST00000482027 1129 ntBASIC13.29□□□□□ -0.28
VBP1P61758 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.29□□□□□ -0.28
VBP1P61758 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.29□□□□□ -0.28
VBP1P61758 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC13.29□□□□□ -0.28
VBP1P61758 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
VBP1P61758 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
VBP1P61758 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
VBP1P61758 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.29□□□□□ -0.28
VBP1P61758 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms