Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
RPS3AP61247 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 COX5BP8-201ENST00000416911 349 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 SOCS2P1-201ENST00000417727 557 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 AC098850.1-201ENST00000419919 790 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.98□□□□□ -0.17
RPS3AP61247 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.98□□□□□ -0.17
RPS3AP61247 GAPDHP21-201ENST00000450301 1010 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.98□□□□□ -0.17
RPS3AP61247 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 CTBP2P3-201ENST00000585629 1255 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.98□□□□□ -0.17
RPS3AP61247 AC239800.4-201ENST00000603712 296 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.98□□□□□ -0.17
RPS3AP61247 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 AP001267.2-201ENST00000532619 2086 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
RPS3AP61247 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.98□□□□□ -0.17
RPS3AP61247 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.97□□□□□ -0.17
RPS3AP61247 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
RPS3AP61247 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.97□□□□□ -0.17
RPS3AP61247 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
RPS3AP61247 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.97□□□□□ -0.17
RPS3AP61247 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 WFDC1-204ENST00000613603 549 ntBASIC13.97□□□□□ -0.17
RPS3AP61247 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RPS3AP61247 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.97□□□□□ -0.17
RPS3AP61247 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 KRT8P22-201ENST00000562317 1415 ntBASIC13.97□□□□□ -0.17
RPS3AP61247 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
RPS3AP61247 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.97□□□□□ -0.17
RPS3AP61247 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
RPS3AP61247 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms