Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NR1H2P55055 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H2P55055 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H2P55055 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H2P55055 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.13□□□□□ -0.15
NR1H2P55055 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
NR1H2P55055 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.13□□□□□ -0.15
NR1H2P55055 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.13□□□□□ -0.15
NR1H2P55055 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NR1H2P55055 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
NR1H2P55055 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NR1H2P55055 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NR1H2P55055 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 MRPS18AP1-201ENST00000414458 589 ntBASIC14.12□□□□□ -0.15
NR1H2P55055 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.12□□□□□ -0.15
NR1H2P55055 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.12□□□□□ -0.15
NR1H2P55055 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
NR1H2P55055 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
NR1H2P55055 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NR1H2P55055 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
NR1H2P55055 FAM90A12P-201ENST00000519497 2375 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 FAM90A24P-201ENST00000520792 2369 ntBASIC14.11□□□□□ -0.15
NR1H2P55055 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
NR1H2P55055 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
NR1H2P55055 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms