Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.24■□□□□ 0.19
PMS1P54277 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 AC098614.1-201ENST00000368528 745 ntBASIC16.24■□□□□ 0.19
PMS1P54277 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.24■□□□□ 0.19
PMS1P54277 AC005229.1-201ENST00000392885 409 ntBASIC16.24■□□□□ 0.19
PMS1P54277 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
PMS1P54277 FAM197Y7-201ENST00000432892 766 ntBASIC16.24■□□□□ 0.19
PMS1P54277 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.24■□□□□ 0.19
PMS1P54277 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.24■□□□□ 0.19
PMS1P54277 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.24■□□□□ 0.19
PMS1P54277 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 MIR4683-201ENST00000579659 81 ntBASIC16.24■□□□□ 0.19
PMS1P54277 MIR6074-201ENST00000612054 107 ntBASIC16.24■□□□□ 0.19
PMS1P54277 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.24■□□□□ 0.19
PMS1P54277 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PMS1P54277 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PMS1P54277 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PMS1P54277 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
PMS1P54277 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 TPM3P8-201ENST00000330554 643 ntBASIC16.23■□□□□ 0.19
PMS1P54277 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.23■□□□□ 0.19
PMS1P54277 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 PUDPP3-201ENST00000445368 636 ntBASIC16.23■□□□□ 0.19
PMS1P54277 AC007389.4-201ENST00000454674 793 ntBASIC16.23■□□□□ 0.19
PMS1P54277 RN7SL692P-201ENST00000464677 288 ntBASIC16.23■□□□□ 0.19
PMS1P54277 FTH1P14-201ENST00000482930 551 ntBASIC16.23■□□□□ 0.19
PMS1P54277 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PMS1P54277 AL596325.1-201ENST00000563991 1082 ntBASIC16.23■□□□□ 0.19
PMS1P54277 OR10B1P-201ENST00000601666 907 ntBASIC16.23■□□□□ 0.19
PMS1P54277 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.23■□□□□ 0.19
PMS1P54277 IGHV3-72-202ENST00000621503 303 ntBASIC16.23■□□□□ 0.19
PMS1P54277 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PMS1P54277 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PMS1P54277 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.23■□□□□ 0.19
PMS1P54277 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PMS1P54277 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PMS1P54277 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PMS1P54277 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PMS1P54277 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
PMS1P54277 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC16.22■□□□□ 0.19
PMS1P54277 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 HPD-204ENST00000543163 1709 ntTSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PMS1P54277 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC16.22■□□□□ 0.19
PMS1P54277 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms