Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CPT1AP50416 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPT1AP50416 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPT1AP50416 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.21■□□□□ 0.18
CPT1AP50416 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPT1AP50416 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CPT1AP50416 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CPT1AP50416 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPT1AP50416 AC007950.2-201ENST00000615045 2347 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPT1AP50416 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC16.2■□□□□ 0.18
CPT1AP50416 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.2■□□□□ 0.18
CPT1AP50416 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.2■□□□□ 0.18
CPT1AP50416 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.2■□□□□ 0.18
CPT1AP50416 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 AC114501.1-201ENST00000445949 172 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.2■□□□□ 0.18
CPT1AP50416 AC018463.1-201ENST00000456674 917 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.2■□□□□ 0.18
CPT1AP50416 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.2■□□□□ 0.18
CPT1AP50416 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 NUDT4P2-201ENST00000578341 546 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 AP001184.1-201ENST00000637936 376 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPT1AP50416 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPT1AP50416 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPT1AP50416 AC067930.6-201ENST00000623257 4947 ntBASIC16.2■□□□□ 0.18
CPT1AP50416 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CPT1AP50416 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CPT1AP50416 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC16.19■□□□□ 0.18
CPT1AP50416 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC16.19■□□□□ 0.18
CPT1AP50416 AP002353.1-201ENST00000528257 1599 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CPT1AP50416 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 RN7SL277P-201ENST00000481521 288 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 MRPL22P1-201ENST00000505398 616 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 CTBP2P4-201ENST00000513884 920 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 IGHV3-37-201ENST00000518544 340 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 MIR6858-201ENST00000620733 67 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC16.19■□□□□ 0.18
CPT1AP50416 AC025271.4-201ENST00000621477 1726 ntBASIC16.19■□□□□ 0.18
CPT1AP50416 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.19■□□□□ 0.18
CPT1AP50416 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CPT1AP50416 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CPT1AP50416 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
CPT1AP50416 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
CPT1AP50416 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CPT1AP50416 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.18■□□□□ 0.18
CPT1AP50416 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms