Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1DP48730 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AL008707.1-201ENST00000422498 534 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 AC078875.1-201ENST00000431907 724 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 XBP1P1-201ENST00000436573 652 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 BX284668.4-201ENST00000453917 508 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AC009779.1-201ENST00000551138 283 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1DP48730 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.73□□□□□ -0.05
CSNK1DP48730 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AC020914.3-201ENST00000594712 304 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 AC104506.1-201ENST00000609247 429 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
CSNK1DP48730 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
CSNK1DP48730 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.73□□□□□ -0.05
CSNK1DP48730 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.73□□□□□ -0.05
CSNK1DP48730 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.73□□□□□ -0.05
CSNK1DP48730 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AC136759.1-202ENST00000530858 2194 ntBASIC14.73□□□□□ -0.05
CSNK1DP48730 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CSNK1DP48730 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.73□□□□□ -0.05
CSNK1DP48730 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CSNK1DP48730 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSNK1DP48730 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 PCDHA3-202ENST00000532566 4594 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSNK1DP48730 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CSNK1DP48730 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 KRT18P36-201ENST00000411618 1276 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 AKR7A2P1-201ENST00000460134 915 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.72□□□□□ -0.05
CSNK1DP48730 SCARNA20.5-201ENST00000516991 142 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1DP48730 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.72□□□□□ -0.05
CSNK1DP48730 AC138649.2-201ENST00000615886 705 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.72□□□□□ -0.05
CSNK1DP48730 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 RN7SL832P-201ENST00000607781 1756 ntBASIC14.72□□□□□ -0.05
CSNK1DP48730 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSNK1DP48730 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.72□□□□□ -0.05
CSNK1DP48730 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms