Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL15A1P39059 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL15A1P39059 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COL15A1P39059 AL357563.1-201ENST00000404728 395 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC18.44■□□□□ 0.54
COL15A1P39059 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 KHSRPP1-201ENST00000427983 1768 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 AL354861.1-201ENST00000445213 355 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 AL157792.1-201ENST00000488281 530 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 AP000911.2-201ENST00000534330 502 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC18.44■□□□□ 0.54
COL15A1P39059 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.44■□□□□ 0.54
COL15A1P39059 DRG2-220ENST00000583355 891 ntTSL 3 BASIC18.44■□□□□ 0.54
COL15A1P39059 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 AC009145.4-201ENST00000625119 1294 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL15A1P39059 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 AP002353.1-201ENST00000528257 1599 ntBASIC18.44■□□□□ 0.54
COL15A1P39059 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL15A1P39059 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.43■□□□□ 0.54
COL15A1P39059 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC18.43■□□□□ 0.54
COL15A1P39059 HLA-DMA-203ENST00000395305 777 ntBASIC18.43■□□□□ 0.54
COL15A1P39059 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
COL15A1P39059 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.43■□□□□ 0.54
COL15A1P39059 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL15A1P39059 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 CR383656.3-201ENST00000551315 183 ntBASIC18.43■□□□□ 0.54
COL15A1P39059 KRT8P1-201ENST00000557533 1207 ntBASIC18.43■□□□□ 0.54
COL15A1P39059 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC18.43■□□□□ 0.54
COL15A1P39059 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC18.43■□□□□ 0.54
COL15A1P39059 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC18.43■□□□□ 0.54
COL15A1P39059 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC18.43■□□□□ 0.54
COL15A1P39059 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL15A1P39059 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.43■□□□□ 0.54
COL15A1P39059 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.43■□□□□ 0.54
COL15A1P39059 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
COL15A1P39059 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.43■□□□□ 0.54
COL15A1P39059 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL15A1P39059 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC004837.1-201ENST00000446267 564 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC18.42■□□□□ 0.54
COL15A1P39059 AP003398.1-201ENST00000531124 318 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.42■□□□□ 0.54
COL15A1P39059 AC141586.1-203ENST00000567242 366 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 RN7SL470P-201ENST00000583069 259 ntBASIC18.42■□□□□ 0.54
COL15A1P39059 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
COL15A1P39059 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
COL15A1P39059 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.42■□□□□ 0.54
COL15A1P39059 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms