Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.29■□□□□ 0.04
CCR1P32246 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.29■□□□□ 0.04
CCR1P32246 TPT1P11-201ENST00000458482 498 ntBASIC15.29■□□□□ 0.04
CCR1P32246 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.29■□□□□ 0.04
CCR1P32246 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 AC022447.6-201ENST00000515522 438 ntBASIC15.29■□□□□ 0.04
CCR1P32246 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.29■□□□□ 0.04
CCR1P32246 FAM8A2P-201ENST00000528813 1142 ntBASIC15.29■□□□□ 0.04
CCR1P32246 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.29■□□□□ 0.04
CCR1P32246 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.29■□□□□ 0.04
CCR1P32246 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR1P32246 AC005695.3-201ENST00000614522 232 ntBASIC15.29■□□□□ 0.04
CCR1P32246 AL162426.1-201ENST00000624141 743 ntBASIC15.29■□□□□ 0.04
CCR1P32246 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR1P32246 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 AC140479.7-201ENST00000636301 2332 ntBASIC15.29■□□□□ 0.04
CCR1P32246 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 AC232323.1-201ENST00000540724 2099 ntBASIC15.29■□□□□ 0.04
CCR1P32246 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CCR1P32246 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.29■□□□□ 0.04
CCR1P32246 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.29■□□□□ 0.04
CCR1P32246 KHSRPP1-201ENST00000427983 1768 ntBASIC15.29■□□□□ 0.04
CCR1P32246 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CCR1P32246 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CCR1P32246 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 AC006504.5-208ENST00000588784 2401 ntBASIC15.28■□□□□ 0.04
CCR1P32246 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CCR1P32246 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.28■□□□□ 0.04
CCR1P32246 POM121L10P-201ENST00000436994 1285 ntBASIC15.28■□□□□ 0.04
CCR1P32246 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 AC092658.1-201ENST00000505836 891 ntBASIC15.28■□□□□ 0.04
CCR1P32246 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.28■□□□□ 0.04
CCR1P32246 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.28■□□□□ 0.04
CCR1P32246 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.28■□□□□ 0.04
CCR1P32246 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.28■□□□□ 0.04
CCR1P32246 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.28■□□□□ 0.04
CCR1P32246 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
CCR1P32246 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CCR1P32246 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CCR1P32246 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.28■□□□□ 0.04
CCR1P32246 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms