Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.73■□□□□ 0.43
KCNA3P22001 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNA3P22001 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 NHP2P1-201ENST00000335274 462 ntBASIC17.73■□□□□ 0.43
KCNA3P22001 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA3P22001 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA3P22001 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA3P22001 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.73■□□□□ 0.43
KCNA3P22001 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
KCNA3P22001 APOC1-209ENST00000592885 562 ntTSL 3 BASIC17.73■□□□□ 0.43
KCNA3P22001 AC091769.1-201ENST00000619576 568 ntBASIC17.73■□□□□ 0.43
KCNA3P22001 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 FER1L4-210ENST00000615531 5998 ntBASIC17.73■□□□□ 0.43
KCNA3P22001 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
KCNA3P22001 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
KCNA3P22001 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
KCNA3P22001 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
KCNA3P22001 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC17.72■□□□□ 0.43
KCNA3P22001 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 RN7SL375P-201ENST00000492442 298 ntBASIC17.72■□□□□ 0.43
KCNA3P22001 IGHEP2-201ENST00000519308 1256 ntBASIC17.72■□□□□ 0.43
KCNA3P22001 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
KCNA3P22001 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC17.72■□□□□ 0.43
KCNA3P22001 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC17.72■□□□□ 0.43
KCNA3P22001 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
KCNA3P22001 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
KCNA3P22001 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
KCNA3P22001 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
KCNA3P22001 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 AC023024.2-201ENST00000623561 1993 ntBASIC17.71■□□□□ 0.43
KCNA3P22001 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
KCNA3P22001 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.71■□□□□ 0.43
KCNA3P22001 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
KCNA3P22001 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
KCNA3P22001 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms