Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
EPHA1P21709 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
EPHA1P21709 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 AC079781.5-202ENST00000641784 3743 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
EPHA1P21709 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 BRWD1P1-201ENST00000401091 371 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.81□□□□□ -0.36
EPHA1P21709 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 BCRP2-202ENST00000447763 634 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 BCRP6-201ENST00000510112 632 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 BCRP7-201ENST00000511549 544 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 SLED1-202ENST00000512051 380 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 AC068587.3-201ENST00000526613 355 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.81□□□□□ -0.36
EPHA1P21709 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.81□□□□□ -0.36
EPHA1P21709 HNRNPUP1-201ENST00000554987 333 ntBASIC12.81□□□□□ -0.36
EPHA1P21709 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.81□□□□□ -0.36
EPHA1P21709 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
EPHA1P21709 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.81□□□□□ -0.36
EPHA1P21709 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
EPHA1P21709 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.81□□□□□ -0.36
EPHA1P21709 AC140479.7-201ENST00000636301 2332 ntBASIC12.8□□□□□ -0.36
EPHA1P21709 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.8□□□□□ -0.36
EPHA1P21709 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
EPHA1P21709 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.8□□□□□ -0.36
EPHA1P21709 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
EPHA1P21709 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.8□□□□□ -0.36
EPHA1P21709 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
EPHA1P21709 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.8□□□□□ -0.36
EPHA1P21709 CR383656.2-201ENST00000548656 2254 ntBASIC12.8□□□□□ -0.36
EPHA1P21709 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.8□□□□□ -0.36
EPHA1P21709 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
EPHA1P21709 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.8□□□□□ -0.36
EPHA1P21709 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
EPHA1P21709 AC005229.1-201ENST00000392885 409 ntBASIC12.8□□□□□ -0.36
EPHA1P21709 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.8□□□□□ -0.36
EPHA1P21709 FAM21FP-201ENST00000426241 1131 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms