Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CAPN3P20807 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CAPN3P20807 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
CAPN3P20807 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.3□□□□□ -0.12
CAPN3P20807 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 AC093004.1-201ENST00000508850 424 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 SPDYE18-201ENST00000510091 1050 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.3□□□□□ -0.12
CAPN3P20807 AC026410.3-201ENST00000514280 936 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 MIR4525-201ENST00000580000 75 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 AC099568.2-201ENST00000609194 695 ntBASIC14.3□□□□□ -0.12
CAPN3P20807 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CAPN3P20807 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CAPN3P20807 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
CAPN3P20807 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CAPN3P20807 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.3□□□□□ -0.12
CAPN3P20807 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CAPN3P20807 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
CAPN3P20807 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN3P20807 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN3P20807 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN3P20807 AC132938.2-201ENST00000579188 680 ntBASIC14.29□□□□□ -0.12
CAPN3P20807 AC008738.7-201ENST00000609744 511 ntBASIC14.29□□□□□ -0.12
CAPN3P20807 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 AL591163.1-201ENST00000641757 987 ntBASIC14.29□□□□□ -0.12
CAPN3P20807 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CAPN3P20807 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN3P20807 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 SBF1P1-201ENST00000444527 5631 ntBASIC14.29□□□□□ -0.12
CAPN3P20807 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN3P20807 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN3P20807 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN3P20807 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN3P20807 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms