Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC12.43□□□□□ -0.42
CXCL3P19876 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CXCL3P19876 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.43□□□□□ -0.42
CXCL3P19876 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CXCL3P19876 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.43□□□□□ -0.42
CXCL3P19876 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 Z98257.2-202ENST00000641138 1548 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CXCL3P19876 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CXCL3P19876 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 SLC4A1APP2-201ENST00000424054 1259 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 TARDBPP1-201ENST00000442013 1203 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 AC026979.3-201ENST00000607315 403 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 AC117500.6-201ENST00000624871 588 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.42□□□□□ -0.42
CXCL3P19876 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 AC115284.2-201ENST00000624646 2054 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CXCL3P19876 TNRC18P1-201ENST00000502875 3650 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CXCL3P19876 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 MIR193BHG-211ENST00000641433 5365 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
CXCL3P19876 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.42□□□□□ -0.42
CXCL3P19876 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CXCL3P19876 PCDHA5-203ENST00000614258 4248 ntBASIC12.42□□□□□ -0.42
CXCL3P19876 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
CXCL3P19876 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 AL445250.1-201ENST00000641671 2259 ntBASIC12.41□□□□□ -0.42
CXCL3P19876 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CXCL3P19876 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.41□□□□□ -0.42
CXCL3P19876 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CXCL3P19876 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CXCL3P19876 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms