Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.91■□□□□ 0.14
CD58P19256 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.91■□□□□ 0.14
CD58P19256 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 BNIP3P42-201ENST00000454982 569 ntBASIC15.91■□□□□ 0.14
CD58P19256 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.91■□□□□ 0.14
CD58P19256 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 GCOM2-201ENST00000509133 1104 ntBASIC15.91■□□□□ 0.14
CD58P19256 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.91■□□□□ 0.14
CD58P19256 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.91■□□□□ 0.14
CD58P19256 BNIP3P29-201ENST00000598302 571 ntBASIC15.91■□□□□ 0.14
CD58P19256 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.91■□□□□ 0.14
CD58P19256 AC011447.5-201ENST00000616168 564 ntBASIC15.91■□□□□ 0.14
CD58P19256 AC008687.7-202ENST00000637404 953 ntBASIC15.91■□□□□ 0.14
CD58P19256 AC002472.3-201ENST00000640124 621 ntBASIC15.91■□□□□ 0.14
CD58P19256 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 AP001267.2-201ENST00000532619 2086 ntBASIC15.91■□□□□ 0.14
CD58P19256 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.91■□□□□ 0.14
CD58P19256 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
CD58P19256 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.91■□□□□ 0.14
CD58P19256 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD58P19256 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.9■□□□□ 0.14
CD58P19256 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
CD58P19256 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.9■□□□□ 0.14
CD58P19256 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 CNN2P10-201ENST00000443067 918 ntBASIC15.9■□□□□ 0.14
CD58P19256 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.9■□□□□ 0.14
CD58P19256 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.9■□□□□ 0.14
CD58P19256 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC15.9■□□□□ 0.14
CD58P19256 C2orf69P2-201ENST00000562032 1123 ntBASIC15.9■□□□□ 0.14
CD58P19256 MIR4741-201ENST00000579822 90 ntBASIC15.9■□□□□ 0.14
CD58P19256 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.9■□□□□ 0.14
CD58P19256 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD58P19256 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 MRPL37P1-201ENST00000592451 1337 ntBASIC15.9■□□□□ 0.14
CD58P19256 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.9■□□□□ 0.14
CD58P19256 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD58P19256 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
CD58P19256 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD58P19256 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CD58P19256 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
CD58P19256 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD58P19256 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.89■□□□□ 0.13
CD58P19256 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.89■□□□□ 0.13
CD58P19256 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms