Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
CCL3L1P16619 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL3L1P16619 YBX1P6-201ENST00000442962 1002 ntBASIC12.23□□□□□ -0.45
CCL3L1P16619 HOMER2P2-201ENST00000451621 847 ntBASIC12.23□□□□□ -0.45
CCL3L1P16619 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 MIR4741-201ENST00000579822 90 ntBASIC12.23□□□□□ -0.45
CCL3L1P16619 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL3L1P16619 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
CCL3L1P16619 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL3L1P16619 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL3L1P16619 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL3L1P16619 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL3L1P16619 AL136309.1-201ENST00000403917 691 ntBASIC12.22□□□□□ -0.45
CCL3L1P16619 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL3L1P16619 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL3L1P16619 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL3L1P16619 AC022447.6-201ENST00000515522 438 ntBASIC12.22□□□□□ -0.45
CCL3L1P16619 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.22□□□□□ -0.45
CCL3L1P16619 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.22□□□□□ -0.45
CCL3L1P16619 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ZACNP1-201ENST00000612259 710 ntBASIC12.22□□□□□ -0.45
CCL3L1P16619 AC009542.2-202ENST00000619004 1067 ntBASIC12.22□□□□□ -0.45
CCL3L1P16619 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
CCL3L1P16619 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.22□□□□□ -0.45
CCL3L1P16619 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
CCL3L1P16619 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 AC005912.2-201ENST00000619492 2400 ntBASIC12.21□□□□□ -0.45
CCL3L1P16619 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.21□□□□□ -0.45
CCL3L1P16619 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
CCL3L1P16619 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.21□□□□□ -0.45
CCL3L1P16619 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms