Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TOP1P11387 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TOP1P11387 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 AC018735.1-201ENST00000437208 1502 ntBASIC17.38■□□□□ 0.37
TOP1P11387 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.38■□□□□ 0.37
TOP1P11387 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.38■□□□□ 0.37
TOP1P11387 MIR4783-201ENST00000580343 82 ntBASIC17.38■□□□□ 0.37
TOP1P11387 AC009955.4-201ENST00000597192 544 ntBASIC17.38■□□□□ 0.37
TOP1P11387 AC243960.2-201ENST00000600996 747 ntBASIC17.38■□□□□ 0.37
TOP1P11387 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.38■□□□□ 0.37
TOP1P11387 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TOP1P11387 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.38■□□□□ 0.37
TOP1P11387 AC020907.1-201ENST00000616460 1350 ntBASIC17.38■□□□□ 0.37
TOP1P11387 SBF1P1-201ENST00000444527 5631 ntBASIC17.38■□□□□ 0.37
TOP1P11387 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.38■□□□□ 0.37
TOP1P11387 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TOP1P11387 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC17.37■□□□□ 0.37
TOP1P11387 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.37■□□□□ 0.37
TOP1P11387 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 ZNF767P-206ENST00000513792 565 ntBASIC17.37■□□□□ 0.37
TOP1P11387 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.37■□□□□ 0.37
TOP1P11387 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17.37■□□□□ 0.37
TOP1P11387 AC005730.2-201ENST00000564549 1184 ntBASIC17.37■□□□□ 0.37
TOP1P11387 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.37■□□□□ 0.37
TOP1P11387 GPR182-203ENST00000622922 591 ntBASIC17.37■□□□□ 0.37
TOP1P11387 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TOP1P11387 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
TOP1P11387 AC139749.1-202ENST00000617529 3139 ntBASIC17.36■□□□□ 0.37
TOP1P11387 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.36■□□□□ 0.37
TOP1P11387 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TOP1P11387 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC17.36■□□□□ 0.37
TOP1P11387 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TOP1P11387 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.36■□□□□ 0.37
TOP1P11387 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.36■□□□□ 0.37
TOP1P11387 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.36■□□□□ 0.37
TOP1P11387 AC004898.1-201ENST00000451057 766 ntBASIC17.36■□□□□ 0.37
TOP1P11387 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms