Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
HOXC6P09630 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HOXC6P09630 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HOXC6P09630 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HOXC6P09630 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC6P09630 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AC139712.1-201ENST00000378256 1875 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AC092135.3-201ENST00000624151 1846 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AL357563.1-201ENST00000404728 395 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC6P09630 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC6P09630 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.5■□□□□ 0.23
HOXC6P09630 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 AC005041.3-201ENST00000606287 649 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC6P09630 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC6P09630 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.5■□□□□ 0.23
HOXC6P09630 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HOXC6P09630 AL136172.1-201ENST00000598590 1394 ntBASIC16.5■□□□□ 0.23
HOXC6P09630 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.5■□□□□ 0.23
HOXC6P09630 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HOXC6P09630 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC6P09630 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC6P09630 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 ALG1L13P-202ENST00000519320 584 ntBASIC16.49■□□□□ 0.23
HOXC6P09630 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC6P09630 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC6P09630 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.49■□□□□ 0.23
HOXC6P09630 MIR3180-2-201ENST00000581748 88 ntBASIC16.49■□□□□ 0.23
HOXC6P09630 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC6P09630 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.49■□□□□ 0.23
HOXC6P09630 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
HOXC6P09630 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC6P09630 AC138466.5-201ENST00000624002 808 ntBASIC16.49■□□□□ 0.23
HOXC6P09630 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.49■□□□□ 0.23
HOXC6P09630 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.49■□□□□ 0.23
HOXC6P09630 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.49■□□□□ 0.23
HOXC6P09630 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HOXC6P09630 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HOXC6P09630 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC6P09630 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC6P09630 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms