Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CD48P09326 AC006453.4-201ENST00000636949 1252 ntBASIC15.31■□□□□ 0.04
CD48P09326 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 F10-203ENST00000409306 1450 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.31■□□□□ 0.04
CD48P09326 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CD48P09326 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CD48P09326 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CD48P09326 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.3■□□□□ 0.04
CD48P09326 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CD48P09326 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.3■□□□□ 0.04
CD48P09326 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.3■□□□□ 0.04
CD48P09326 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD48P09326 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CD48P09326 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.3■□□□□ 0.04
CD48P09326 PUDPP3-201ENST00000445368 636 ntBASIC15.3■□□□□ 0.04
CD48P09326 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.3■□□□□ 0.04
CD48P09326 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
CD48P09326 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.3■□□□□ 0.04
CD48P09326 ALG3P1-201ENST00000508806 1114 ntBASIC15.3■□□□□ 0.04
CD48P09326 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.3■□□□□ 0.04
CD48P09326 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.3■□□□□ 0.04
CD48P09326 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.3■□□□□ 0.04
CD48P09326 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD48P09326 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 LINC02084-201ENST00000606069 1096 ntBASIC15.3■□□□□ 0.04
CD48P09326 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.3■□□□□ 0.04
CD48P09326 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CD48P09326 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CD48P09326 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CD48P09326 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 AL354989.2-201ENST00000435838 1540 ntBASIC15.29■□□□□ 0.04
CD48P09326 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.29■□□□□ 0.04
CD48P09326 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.29■□□□□ 0.04
CD48P09326 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.29■□□□□ 0.04
CD48P09326 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CD48P09326 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms