Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 AL360270.3-201ENST00000609118 1348 ntBASIC12.97□□□□□ -0.33
SFTPBP07988 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 AC004066.1-201ENST00000502488 802 ntBASIC12.97□□□□□ -0.33
SFTPBP07988 GAPDHP40-201ENST00000505218 1006 ntBASIC12.97□□□□□ -0.33
SFTPBP07988 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.97□□□□□ -0.33
SFTPBP07988 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SFTPBP07988 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SFTPBP07988 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.97□□□□□ -0.33
SFTPBP07988 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.97□□□□□ -0.33
SFTPBP07988 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
SFTPBP07988 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SFTPBP07988 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.96□□□□□ -0.33
SFTPBP07988 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.96□□□□□ -0.33
SFTPBP07988 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC12.96□□□□□ -0.33
SFTPBP07988 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC12.96□□□□□ -0.33
SFTPBP07988 MEP1AP4-201ENST00000423244 1087 ntBASIC12.96□□□□□ -0.33
SFTPBP07988 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC12.96□□□□□ -0.33
SFTPBP07988 AC123567.1-201ENST00000548294 1261 ntBASIC12.96□□□□□ -0.33
SFTPBP07988 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.96□□□□□ -0.33
SFTPBP07988 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.96□□□□□ -0.33
SFTPBP07988 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
SFTPBP07988 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SFTPBP07988 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SFTPBP07988 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SFTPBP07988 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.96□□□□□ -0.34
SFTPBP07988 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms