Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 CCDC148-201ENST00000283233 3122 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC3P02656 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC3P02656 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 GUK1-205ENST00000366722 850 ntTSL 3 BASIC11.84□□□□□ -0.51
APOC3P02656 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
APOC3P02656 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.84□□□□□ -0.51
APOC3P02656 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 AC124864.1-201ENST00000623408 392 ntBASIC11.84□□□□□ -0.51
APOC3P02656 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC3P02656 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC3P02656 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC11.84□□□□□ -0.51
APOC3P02656 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
APOC3P02656 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
APOC3P02656 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
APOC3P02656 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
APOC3P02656 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 GRK7-201ENST00000264952 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 AL391647.1-201ENST00000395664 511 ntBASIC11.83□□□□□ -0.52
APOC3P02656 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC3P02656 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 AL845331.1-201ENST00000424978 1190 ntBASIC11.83□□□□□ -0.52
APOC3P02656 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC3P02656 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC11.83□□□□□ -0.52
APOC3P02656 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.83□□□□□ -0.52
APOC3P02656 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.83□□□□□ -0.52
APOC3P02656 EGLN1P1-201ENST00000531623 762 ntBASIC11.83□□□□□ -0.52
APOC3P02656 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC11.83□□□□□ -0.52
APOC3P02656 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC11.83□□□□□ -0.52
APOC3P02656 AL121672.3-201ENST00000608644 468 ntBASIC11.83□□□□□ -0.52
APOC3P02656 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 AP000867.4-201ENST00000641616 219 ntBASIC11.83□□□□□ -0.52
APOC3P02656 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC11.83□□□□□ -0.52
APOC3P02656 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
APOC3P02656 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 PI4KAP1-204ENST00000612579 1703 ntBASIC11.83□□□□□ -0.52
APOC3P02656 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC11.83□□□□□ -0.52
APOC3P02656 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
APOC3P02656 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 AC087164.2-201ENST00000624514 3130 ntBASIC11.82□□□□□ -0.52
APOC3P02656 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.82□□□□□ -0.52
APOC3P02656 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
APOC3P02656 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
APOC3P02656 OSBP2-203ENST00000403222 3728 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms