Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.61□□□□□ -0.23
NKX2-2O95096 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 MIR6775-201ENST00000617557 69 ntBASIC13.61□□□□□ -0.23
NKX2-2O95096 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.61□□□□□ -0.23
NKX2-2O95096 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 AC020910.6-201ENST00000623084 1459 ntBASIC13.61□□□□□ -0.23
NKX2-2O95096 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.61□□□□□ -0.23
NKX2-2O95096 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
NKX2-2O95096 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-2O95096 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
NKX2-2O95096 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 MIR326-201ENST00000362220 95 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.6□□□□□ -0.23
NKX2-2O95096 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX2-2O95096 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX2-2O95096 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.6□□□□□ -0.23
NKX2-2O95096 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX2-2O95096 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.6□□□□□ -0.23
NKX2-2O95096 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-2O95096 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.6□□□□□ -0.23
NKX2-2O95096 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
NKX2-2O95096 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
NKX2-2O95096 MIR600HG-201ENST00000449175 5984 ntBASIC13.6□□□□□ -0.23
NKX2-2O95096 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 AC012617.1-204ENST00000586340 2305 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 AC136759.1-202ENST00000530858 2194 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NKX2-2O95096 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.59□□□□□ -0.23
NKX2-2O95096 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.59□□□□□ -0.23
NKX2-2O95096 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.59□□□□□ -0.23
NKX2-2O95096 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
NKX2-2O95096 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.59□□□□□ -0.23
NKX2-2O95096 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms