Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ANKRD19P-201ENST00000338192 862 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AL136309.1-201ENST00000403917 691 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 PUDPP3-201ENST00000445368 636 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 CTBP2P5-201ENST00000454986 1264 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC103988.2-201ENST00000561804 725 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAF3IP2O43734 AC139712.1-201ENST00000378256 1875 ntBASIC13.19□□□□□ -0.3
TRAF3IP2O43734 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AC015688.4-201ENST00000580780 1647 ntBASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 KLF2P4-201ENST00000451959 1225 ntBASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 SNX29P1-201ENST00000548357 1007 ntBASIC13.18□□□□□ -0.3
TRAF3IP2O43734 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TRAF3IP2O43734 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
TRAF3IP2O43734 KHSRPP1-201ENST00000427983 1768 ntBASIC13.17□□□□□ -0.3
TRAF3IP2O43734 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms