Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
O00370 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.79■□□□□ 0.12
O00370 MIR658-201ENST00000385210 100 ntBASIC15.79■□□□□ 0.12
O00370 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 CNN2P10-201ENST00000443067 918 ntBASIC15.79■□□□□ 0.12
O00370 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.79■□□□□ 0.12
O00370 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.79■□□□□ 0.12
O00370 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 MIR4683-201ENST00000579659 81 ntBASIC15.79■□□□□ 0.12
O00370 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.79■□□□□ 0.12
O00370 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.79■□□□□ 0.12
O00370 MIR6805-201ENST00000615055 62 ntBASIC15.79■□□□□ 0.12
O00370 AL161772.1-201ENST00000610494 4412 ntBASIC15.79■□□□□ 0.12
O00370 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.79■□□□□ 0.12
O00370 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
O00370 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
O00370 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.79■□□□□ 0.12
O00370 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
O00370 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
O00370 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
O00370 C8orf49-201ENST00000525043 1968 ntBASIC15.78■□□□□ 0.12
O00370 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 AC092135.3-201ENST00000624151 1846 ntBASIC15.78■□□□□ 0.12
O00370 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.78■□□□□ 0.12
O00370 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 MYO15B-237ENST00000642007 4893 ntBASIC15.78■□□□□ 0.12
O00370 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.78■□□□□ 0.12
O00370 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
O00370 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 GK-202ENST00000378941 458 ntTSL 3 BASIC15.78■□□□□ 0.12
O00370 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.78■□□□□ 0.12
O00370 HLA-V-201ENST00000429037 534 ntBASIC15.78■□□□□ 0.12
O00370 ATP5G2P4-201ENST00000442175 420 ntBASIC15.78■□□□□ 0.12
O00370 CSF2RBP1-201ENST00000447905 391 ntBASIC15.78■□□□□ 0.12
O00370 KRT223P-202ENST00000449164 1292 ntBASIC15.78■□□□□ 0.12
O00370 ALG3P1-201ENST00000508806 1114 ntBASIC15.78■□□□□ 0.12
O00370 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.78■□□□□ 0.12
O00370 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 AC023310.1-201ENST00000554836 735 ntBASIC15.78■□□□□ 0.12
O00370 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.78■□□□□ 0.12
O00370 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.78■□□□□ 0.12
O00370 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.78■□□□□ 0.12
O00370 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.78■□□□□ 0.12
O00370 BX088702.1-201ENST00000610784 235 ntBASIC15.78■□□□□ 0.12
O00370 AC133552.6-201ENST00000613406 534 ntBASIC15.78■□□□□ 0.12
O00370 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.78■□□□□ 0.12
O00370 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
O00370 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
O00370 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
O00370 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms