Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 FO681548.1-201ENST00000455617 1132 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1AO00322 RN7SL692P-201ENST00000464677 288 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 AC011495.1-201ENST00000498085 584 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
UPK1AO00322 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.03□□□□□ -0.16
UPK1AO00322 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1AO00322 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 MYO15B-237ENST00000642007 4893 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.03□□□□□ -0.16
UPK1AO00322 AL356585.2-201ENST00000625078 2396 ntBASIC14.03□□□□□ -0.16
UPK1AO00322 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.03□□□□□ -0.16
UPK1AO00322 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
UPK1AO00322 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
UPK1AO00322 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
UPK1AO00322 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
UPK1AO00322 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
UPK1AO00322 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UPK1AO00322 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.02□□□□□ -0.16
UPK1AO00322 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.02□□□□□ -0.16
UPK1AO00322 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UPK1AO00322 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
UPK1AO00322 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK1AO00322 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
UPK1AO00322 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK1AO00322 AP005018.1-201ENST00000525475 301 ntBASIC14.02□□□□□ -0.17
UPK1AO00322 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.02□□□□□ -0.17
UPK1AO00322 AL596325.1-201ENST00000563991 1082 ntBASIC14.02□□□□□ -0.17
UPK1AO00322 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.02□□□□□ -0.17
UPK1AO00322 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UPK1AO00322 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
UPK1AO00322 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 PKD1P5-201ENST00000532415 10291 ntBASIC14.02□□□□□ -0.17
UPK1AO00322 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
UPK1AO00322 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.02□□□□□ -0.17
UPK1AO00322 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
UPK1AO00322 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.01□□□□□ -0.17
UPK1AO00322 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AL138709.1-201ENST00000614840 1693 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.01□□□□□ -0.17
UPK1AO00322 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC003102.2-201ENST00000589195 1469 ntBASIC14.01□□□□□ -0.17
UPK1AO00322 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
UPK1AO00322 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.01□□□□□ -0.17
UPK1AO00322 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms