Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.41■□□□□ 0.06
CCDC188H7C350 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC188H7C350 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC188H7C350 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC188H7C350 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
CCDC188H7C350 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC188H7C350 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC188H7C350 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.41■□□□□ 0.06
CCDC188H7C350 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CCDC188H7C350 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CCDC188H7C350 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC188H7C350 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CCDC188H7C350 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCDC188H7C350 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 AP006288.1-201ENST00000446065 395 ntBASIC15.4■□□□□ 0.06
CCDC188H7C350 RN7SL399P-201ENST00000471648 279 ntBASIC15.4■□□□□ 0.06
CCDC188H7C350 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC188H7C350 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC188H7C350 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC188H7C350 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC188H7C350 AC103988.2-201ENST00000561804 725 ntBASIC15.4■□□□□ 0.06
CCDC188H7C350 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.4■□□□□ 0.06
CCDC188H7C350 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.4■□□□□ 0.06
CCDC188H7C350 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
CCDC188H7C350 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CCDC188H7C350 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 TUBB8P4-201ENST00000511806 1324 ntBASIC15.4■□□□□ 0.06
CCDC188H7C350 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CCDC188H7C350 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
CCDC188H7C350 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.39■□□□□ 0.06
CCDC188H7C350 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC188H7C350 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC188H7C350 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 RNU1-114P-201ENST00000365297 166 ntBASIC15.39■□□□□ 0.05
CCDC188H7C350 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC188H7C350 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.39■□□□□ 0.05
CCDC188H7C350 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC188H7C350 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.39■□□□□ 0.05
CCDC188H7C350 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.39■□□□□ 0.05
CCDC188H7C350 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 SORD2P-201ENST00000558556 1069 ntBASIC15.39■□□□□ 0.05
CCDC188H7C350 AC138761.1-201ENST00000584393 385 ntBASIC15.39■□□□□ 0.05
CCDC188H7C350 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 AL138725.1-201ENST00000407347 1314 ntBASIC15.39■□□□□ 0.05
CCDC188H7C350 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CCDC188H7C350 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.39■□□□□ 0.05
CCDC188H7C350 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CCDC188H7C350 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 AC020658.7-201ENST00000624274 2442 ntBASIC15.38■□□□□ 0.05
CCDC188H7C350 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.38■□□□□ 0.05
CCDC188H7C350 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CCDC188H7C350 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms