Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AC015818.8-201ENST00000587907 1519 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 MYADML-201ENST00000474610 2147 ntBASIC12.7□□□□□ -0.38
TMEM235A6NFC5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.7□□□□□ -0.38
TMEM235A6NFC5 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AL138828.2-201ENST00000615812 383 ntBASIC12.69□□□□□ -0.38
TMEM235A6NFC5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.69□□□□□ -0.38
TMEM235A6NFC5 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 TUBB3P1-201ENST00000405796 1332 ntBASIC12.68□□□□□ -0.38
TMEM235A6NFC5 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TMEM235A6NFC5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms