Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CSNK1G3Q9Y6M4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AL359258.3-201ENST00000622910 2331 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 HINT2P1-201ENST00000419438 481 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 TMEM198B-204ENST00000484016 896 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 MIR6720-201ENST00000611664 98 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AL353770.1-201ENST00000614915 403 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 Z98259.2-201ENST00000641583 609 ntBASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CSNK1G3Q9Y6M4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC091951.1-201ENST00000512854 2465 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 KLF2P1-201ENST00000447438 1042 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AL596276.2-201ENST00000447525 331 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 FTLP1-201ENST00000449155 526 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 RCC2P8-201ENST00000502779 1035 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 GCOM2-201ENST00000509133 1104 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC090857.1-201ENST00000527400 390 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC131206.1-201ENST00000538078 1211 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AL009178.2-201ENST00000597278 2719 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 AC023090.2-201ENST00000625182 2110 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 FAM90A7P-201ENST00000382628 1395 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 FAM90A23P-201ENST00000400136 1395 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 ZBED1P1-201ENST00000502364 1930 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 CICP4-201ENST00000447359 2812 ntBASIC14.47□□□□□ -0.09
CSNK1G3Q9Y6M4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CSNK1G3Q9Y6M4 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms