Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 CTSL-202ENST00000342020 933 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 MIR645-201ENST00000385283 94 ntBASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 AC073869.2-201ENST00000417338 1026 ntBASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 VENTXP4-201ENST00000449029 958 ntBASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.67■□□□□ 0.42
ZC3H4Q9UPT8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AC023141.7-201ENST00000430646 407 ntBASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 CROCCP1-201ENST00000426910 5675 ntBASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 AL603832.2-201ENST00000566195 2125 ntBASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZC3H4Q9UPT8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AC099063.4-201ENST00000641099 1602 ntBASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AC013268.4-201ENST00000637413 2228 ntBASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AL109809.1-201ENST00000418979 1367 ntBASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 AC004686.1-201ENST00000605113 538 ntBASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZC3H4Q9UPT8 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC17.64■□□□□ 0.42
ZC3H4Q9UPT8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ZC3H4Q9UPT8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.64■□□□□ 0.42
ZC3H4Q9UPT8 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AC006372.4-201ENST00000624122 1543 ntBASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZC3H4Q9UPT8 TNRC18P2-201ENST00000417666 2714 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms