Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 MIR663B-201ENST00000408361 115 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 POM121L8P-201ENST00000417732 1281 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 POM121L9P-203ENST00000441984 1285 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 HSPB1P2-201ENST00000448722 546 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 IGHJ2P-201ENST00000454480 60 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 SCARNA20.5-201ENST00000516991 142 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 RN7SL713P-201ENST00000582127 302 ntBASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.71□□□□□ -0.21
NPIPA1Q9UND3 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NPIPA1Q9UND3 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 CICP23-201ENST00000605013 2741 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AL359258.3-201ENST00000622910 2331 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AC007686.3-201ENST00000619017 3487 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AC138028.6-201ENST00000616106 1482 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 POM121L10P-201ENST00000436994 1285 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ACTG1P17-201ENST00000558391 1119 ntBASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 KC6-205ENST00000599934 556 ntTSL 4 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
NPIPA1Q9UND3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms