Protein–RNA interactions for Protein: Q9P2E5

CHPF2, Chondroitin sulfate glucuronyltransferase, humanhuman

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2Q9P2E5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 AC007274.2-201ENST00000421675 662 ntBASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 AC006335.1-201ENST00000445200 547 ntBASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 SUPT4H1P2-201ENST00000501248 353 ntBASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 CICP24-201ENST00000605464 2705 ntBASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC18.63■□□□□ 0.57
CHPF2Q9P2E5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 LBH-202ENST00000401506 485 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 GAS5-209ENST00000430245 723 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ST13P19-201ENST00000442505 1124 ntBASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 AC079328.1-201ENST00000560358 952 ntBASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 AC016629.1-201ENST00000596579 586 ntBASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 AL353770.1-201ENST00000614915 403 ntBASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHPF2Q9P2E5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 MYADML-201ENST00000474610 2147 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 RTN3P1-201ENST00000536295 711 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 PGAM1P5-201ENST00000548011 764 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AC242376.1-201ENST00000559033 726 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 AC027237.1-201ENST00000560942 655 ntBASIC18.61■□□□□ 0.57
CHPF2Q9P2E5 MIR4754-201ENST00000582477 89 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms