Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 FAM197Y7-201ENST00000432892 766 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ATP5G2P4-201ENST00000442175 420 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 IGHV3-71-201ENST00000523324 359 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 HILS1-202ENST00000545329 423 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC138466.3-201ENST00000619983 221 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AC131212.3-201ENST00000624087 4219 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 AL354989.2-201ENST00000435838 1540 ntBASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PARPBPQ9NWS1 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC092053.3-201ENST00000641308 4975 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC005089.1-201ENST00000619486 2241 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 MIR1909-201ENST00000411312 80 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC078819.1-201ENST00000547454 765 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC012085.1-201ENST00000548270 765 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC023090.2-201ENST00000625182 2110 ntBASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.32□□□□□ -0.28
PARPBPQ9NWS1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms