Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FANCD2OS-206ENST00000524279 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00958-202ENST00000526388 607 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC023078.4-201ENST00000531736 961 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AP003049.2-201ENST00000532992 540 ntTSL 4 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC092747.2-201ENST00000545069 983 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL358335.1-201ENST00000555388 1066 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC02289-202ENST00000556781 861 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL390955.2-201ENST00000603032 514 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC015849.2-201ENST00000605738 409 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC139100.2-201ENST00000616901 662 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM74A4-202ENST00000618177 469 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL359880.1-201ENST00000621879 266 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AL158801.5-201ENST00000623123 465 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PCBP2-OT1-201ENST00000634357 590 ntBASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 LINC00632-201ENST00000370535 1381 ntTSL 2 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
KRTAP3-3Q9BYR6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC006333.2-201ENST00000607957 2099 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 C15orf41-214ENST00000569302 1325 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FMO6P-205ENST00000639957 1597 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PTAR1-201ENST00000340434 1417 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 EEF1A1P4-201ENST00000359165 1405 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RN7SKP90-201ENST00000363013 335 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RNU5E-8P-201ENST00000363502 116 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 MTCO3P40-201ENST00000392516 676 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RPS3AP23-201ENST00000401762 784 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL354719.1-201ENST00000406535 843 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RN7SKP56-201ENST00000410513 331 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 USP9YP27-201ENST00000418455 438 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RPL36AP35-201ENST00000426082 308 ntBASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL035420.2-201ENST00000433587 616 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 RPE-208ENST00000436630 1128 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AC002480.3-201ENST00000439823 557 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP3-3Q9BYR6 AL359672.1-201ENST00000442302 409 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms