Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.53□□□□□ -0.4
PCGF1Q9BSM1 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.52□□□□□ -0.4
PCGF1Q9BSM1 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AL645937.2-201ENST00000396808 931 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ACTBP8-201ENST00000403258 1108 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AL139094.1-201ENST00000405549 1188 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC099336.1-201ENST00000417053 1171 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 CSF2RBP1-201ENST00000447905 391 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC079316.1-201ENST00000548397 411 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 GNRHR2-203ENST00000581100 1187 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AC006504.5-208ENST00000588784 2401 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.52□□□□□ -0.41
PCGF1Q9BSM1 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms