Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 AP000346.4-201ENST00000614827 381 ntBASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 AL353770.1-201ENST00000614915 403 ntBASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC85AQ96PX6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AC092135.3-201ENST00000624151 1846 ntBASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 CEP164P1-201ENST00000455142 418 ntBASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 RBM8B-201ENST00000555532 525 ntBASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC85AQ96PX6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 OR2K2-202ENST00000374428 1038 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 MIR33B-201ENST00000385104 96 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 FXNP2-201ENST00000411625 547 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 AC234782.1-201ENST00000451950 919 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 AL109837.1-201ENST00000603272 613 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 MEG3_2.1-201ENST00000611456 105 ntBASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC85AQ96PX6 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC85AQ96PX6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC85AQ96PX6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC85AQ96PX6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 AC022532.1-201ENST00000624563 1728 ntBASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC85AQ96PX6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms