Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC074386.1-202ENST00000463561 864 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 AC004066.1-201ENST00000502488 802 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.09□□□□□ -0.31
AP3S1Q92572 FAM86C2P-203ENST00000528684 1004 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.09□□□□□ -0.31
AP3S1Q92572 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 FAM215A-202ENST00000632077 792 ntBASIC13.09□□□□□ -0.31
AP3S1Q92572 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
AP3S1Q92572 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.09□□□□□ -0.31
AP3S1Q92572 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
AP3S1Q92572 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
AP3S1Q92572 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S1Q92572 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S1Q92572 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
AP3S1Q92572 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 AL023775.1-201ENST00000454907 1746 ntBASIC13.08□□□□□ -0.32
AP3S1Q92572 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
AP3S1Q92572 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
AP3S1Q92572 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
AP3S1Q92572 TFAMP1-201ENST00000412727 736 ntBASIC13.08□□□□□ -0.32
AP3S1Q92572 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.08□□□□□ -0.32
AP3S1Q92572 AC098831.1-202ENST00000438821 336 ntBASIC13.08□□□□□ -0.32
AP3S1Q92572 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.08□□□□□ -0.32
AP3S1Q92572 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
AP3S1Q92572 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.08□□□□□ -0.32
AP3S1Q92572 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S1Q92572 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 AL805961.2-201ENST00000642139 4817 ntBASIC13.08□□□□□ -0.32
AP3S1Q92572 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S1Q92572 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S1Q92572 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.08□□□□□ -0.32
AP3S1Q92572 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
AP3S1Q92572 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
AP3S1Q92572 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 OR2I1P-208ENST00000641137 4948 ntBASIC13.07□□□□□ -0.32
AP3S1Q92572 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 AL157414.3-201ENST00000624276 1954 ntBASIC13.07□□□□□ -0.32
AP3S1Q92572 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.07□□□□□ -0.32
AP3S1Q92572 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.07□□□□□ -0.32
AP3S1Q92572 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
AP3S1Q92572 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms