Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.86□□□□□ -0.03
SLC44A1Q8WWI5 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 MRPS18AP1-201ENST00000414458 589 ntBASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 LRRC59-203ENST00000576448 1531 ntBASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 KHSRPP1-201ENST00000427983 1768 ntBASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 AC111170.3-201ENST00000624282 2464 ntBASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SLC44A1Q8WWI5 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC139712.1-201ENST00000378256 1875 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 FAM90A12P-201ENST00000519497 2375 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 FAM90A24P-201ENST00000520792 2369 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 ACTBP8-201ENST00000403258 1108 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AC099568.2-201ENST00000609194 695 ntBASIC14.84□□□□□ -0.03
SLC44A1Q8WWI5 AP005019.2-201ENST00000615104 511 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms