Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 PUDPP3-201ENST00000445368 636 ntBASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AL583810.1-201ENST00000553344 1045 ntBASIC15.67■□□□□ 0.1
UBA3Q8TBC4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AP001002.3-201ENST00000623482 206 ntBASIC15.67■□□□□ 0.1
UBA3Q8TBC4 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA3Q8TBC4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AGGF1P1-201ENST00000509500 2073 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AC099063.4-201ENST00000641099 1602 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 RPS2P32-201ENST00000439199 892 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 RPL13AP20-201ENST00000459725 609 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AC022447.6-201ENST00000515522 438 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 RNA5SP412-201ENST00000516234 123 ntBASIC15.66■□□□□ 0.1
UBA3Q8TBC4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBA3Q8TBC4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBA3Q8TBC4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms