Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 PCDHA6-201ENST00000378126 3267 ntBASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.02□□□□□ -0.32
LYSMD2Q8IV50 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AL731571.1-201ENST00000617058 5428 ntBASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AC079781.3-201ENST00000449110 356 ntBASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 MEX3B-202ENST00000558133 4333 ntBASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LYSMD2Q8IV50 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 HLA-H-201ENST00000383620 1096 ntBASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 TFAMP1-201ENST00000412727 736 ntBASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 MAX-210ENST00000555419 765 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 Z83851.2-201ENST00000609564 659 ntBASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AL691432.3-201ENST00000621860 400 ntBASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.01□□□□□ -0.33
LYSMD2Q8IV50 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms