Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 SPTLC1P1-201ENST00000447199 261 ntBASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC135586.1-201ENST00000539323 574 ntBASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AL033527.5-202ENST00000641632 1098 ntBASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AC105233.6-201ENST00000642093 218 ntBASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 INE2-201ENST00000630399 1874 ntBASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CRLF3Q8IUI8 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 PIN1P1-201ENST00000412108 996 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CRB3P1-201ENST00000449338 276 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 ZNF890P-202ENST00000530367 1156 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AC044860.1-202ENST00000559481 777 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AC025048.3-201ENST00000590609 569 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AC005702.4-201ENST00000618393 416 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AL359183.1-201ENST00000623796 2132 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 KRT8P24-201ENST00000560290 1559 ntBASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CRLF3Q8IUI8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CRLF3Q8IUI8 AC090505.1-201ENST00000430515 1834 ntBASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms