Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ISCA2P1-201ENST00000425548 448 ntBASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AC009884.2-201ENST00000603110 324 ntBASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 CYP4F23P-201ENST00000593402 1579 ntBASIC16.47■□□□□ 0.23
TRIM50Q86XT4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM50Q86XT4 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 RN7SKP214-201ENST00000364208 315 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 AC006122.1-201ENST00000493323 440 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 AL161670.2-201ENST00000557650 1227 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 AC103988.2-201ENST00000561804 725 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 AP000346.4-201ENST00000614827 381 ntBASIC16.46■□□□□ 0.23
TRIM50Q86XT4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM50Q86XT4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRIM50Q86XT4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM50Q86XT4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms