Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 RN7SL582P-201ENST00000491078 279 ntBASIC10.01□□□□□ -0.81
CSMD3Q7Z407 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 AC068831.5-201ENST00000557387 328 ntBASIC10.01□□□□□ -0.81
CSMD3Q7Z407 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 AL118522.1-201ENST00000611368 560 ntBASIC10.01□□□□□ -0.81
CSMD3Q7Z407 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC10.01□□□□□ -0.81
CSMD3Q7Z407 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC10□□□□□ -0.81
CSMD3Q7Z407 RN7SL23P-201ENST00000484055 275 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC10□□□□□ -0.81
CSMD3Q7Z407 RPS23-207ENST00000511844 530 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC020904.3-201ENST00000624199 442 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
CSMD3Q7Z407 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC10□□□□□ -0.81
CSMD3Q7Z407 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC023824.1-201ENST00000562945 2975 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 MROH4P-201ENST00000431302 1578 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 DUX4L50-201ENST00000455245 715 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 AC025186.1-201ENST00000478174 870 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 APOC1-209ENST00000592885 562 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC10□□□□□ -0.81
CSMD3Q7Z407 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC10□□□□□ -0.81
CSMD3Q7Z407 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC018529.2-202ENST00000611482 3087 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC10□□□□□ -0.81
CSMD3Q7Z407 PGAM1P11-201ENST00000416729 680 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC010900.1-201ENST00000449849 1296 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC10□□□□□ -0.81
CSMD3Q7Z407 AC139713.2-207ENST00000641556 1292 ntBASIC10□□□□□ -0.81
CSMD3Q7Z407 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 F10-203ENST00000409306 1450 ntTSL 3 BASIC10□□□□□ -0.81
CSMD3Q7Z407 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC10□□□□□ -0.81
CSMD3Q7Z407 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CSMD3Q7Z407 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
CSMD3Q7Z407 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC9.99□□□□□ -0.81
CSMD3Q7Z407 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 MIR4746-201ENST00000579802 71 ntBASIC9.99□□□□□ -0.81
CSMD3Q7Z407 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CSMD3Q7Z407 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms