Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
SCXQ7RTU7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AL607033.1-201ENST00000623900 1599 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AL355864.2-201ENST00000447420 863 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 BCRP2-202ENST00000447763 634 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 KLF2P4-201ENST00000451959 1225 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 BNIP3P42-201ENST00000454982 569 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC092658.1-201ENST00000505836 891 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 BCRP6-201ENST00000510112 632 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 BCRP7-201ENST00000511549 544 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MFF-223ENST00000524634 647 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 BNIP3P29-201ENST00000598302 571 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AC011447.5-201ENST00000616168 564 ntBASIC9.93□□□□□ -0.82
SCXQ7RTU7 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC9.93□□□□□ -0.82
SCXQ7RTU7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
SCXQ7RTU7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms