Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.07□□□□□ -0.48
CCDC144NLQ6NUI1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 SNX18-202ENST00000343017 3140 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MIR1202-201ENST00000408529 83 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MIR1909-201ENST00000411312 80 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 FAM21FP-201ENST00000426241 1131 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ALG3P1-201ENST00000508806 1114 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 COX11-210ENST00000639671 696 ntBASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
CCDC144NLQ6NUI1 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CCDC144NLQ6NUI1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms