Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 AC144522.1-201ENST00000625111 1658 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CDK3Q00526 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 AC011742.3-201ENST00000439053 820 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 AC005077.2-201ENST00000449786 690 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.5□□□□□ -0.09
CDK3Q00526 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.5□□□□□ -0.09
CDK3Q00526 RBM8B-201ENST00000555532 525 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 AL645939.5-201ENST00000606834 243 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 AC026740.1-201ENST00000607068 791 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 AL354702.1-201ENST00000442006 1960 ntBASIC14.5□□□□□ -0.09
CDK3Q00526 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CDK3Q00526 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.5□□□□□ -0.09
CDK3Q00526 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
CDK3Q00526 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDK3Q00526 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.49□□□□□ -0.09
CDK3Q00526 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.49□□□□□ -0.09
CDK3Q00526 AC125604.1-201ENST00000496255 707 ntBASIC14.49□□□□□ -0.09
CDK3Q00526 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.49□□□□□ -0.09
CDK3Q00526 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.49□□□□□ -0.09
CDK3Q00526 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.49□□□□□ -0.09
CDK3Q00526 AL132994.2-201ENST00000603120 687 ntBASIC14.49□□□□□ -0.09
CDK3Q00526 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC14.49□□□□□ -0.09
CDK3Q00526 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.49□□□□□ -0.09
CDK3Q00526 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDK3Q00526 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.49□□□□□ -0.09
CDK3Q00526 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms