Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14□□□□□ -0.17
RAE1P78406 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 RN7SL713P-201ENST00000582127 302 ntBASIC14□□□□□ -0.17
RAE1P78406 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 AL358472.3-201ENST00000608147 415 ntBASIC14□□□□□ -0.17
RAE1P78406 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14□□□□□ -0.17
RAE1P78406 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 AC138951.2-201ENST00000623455 1161 ntBASIC14□□□□□ -0.17
RAE1P78406 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAE1P78406 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14□□□□□ -0.17
RAE1P78406 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAE1P78406 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14□□□□□ -0.17
RAE1P78406 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 TCAM1P-207ENST00000485295 1537 ntBASIC14□□□□□ -0.17
RAE1P78406 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAE1P78406 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAE1P78406 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 AC006001.1-201ENST00000325130 474 ntBASIC13.99□□□□□ -0.17
RAE1P78406 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
RAE1P78406 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 NME2P1-201ENST00000426182 414 ntBASIC13.99□□□□□ -0.17
RAE1P78406 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RAE1P78406 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 MIR3197-201ENST00000582241 73 ntBASIC13.99□□□□□ -0.17
RAE1P78406 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.99□□□□□ -0.17
RAE1P78406 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 KRT8P24-201ENST00000560290 1559 ntBASIC13.99□□□□□ -0.17
RAE1P78406 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 CICP4-201ENST00000447359 2812 ntBASIC13.99□□□□□ -0.17
RAE1P78406 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RAE1P78406 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.99□□□□□ -0.17
RAE1P78406 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAE1P78406 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAE1P78406 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAE1P78406 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RAE1P78406 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.98□□□□□ -0.17
RAE1P78406 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms