Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 MYCLP2-201ENST00000449268 967 ntBASIC14.54□□□□□ -0.08
CDH13P55290 CYMP-203ENST00000474680 1263 ntBASIC14.54□□□□□ -0.08
CDH13P55290 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.54□□□□□ -0.08
CDH13P55290 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 AL132655.2-201ENST00000596276 594 ntBASIC14.54□□□□□ -0.08
CDH13P55290 AP005019.2-201ENST00000615104 511 ntBASIC14.54□□□□□ -0.08
CDH13P55290 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 AL136172.1-201ENST00000598590 1394 ntBASIC14.54□□□□□ -0.08
CDH13P55290 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 AC090505.1-201ENST00000430515 1834 ntBASIC14.54□□□□□ -0.08
CDH13P55290 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 AC016397.2-201ENST00000624848 1985 ntBASIC14.54□□□□□ -0.08
CDH13P55290 AC011474.4-201ENST00000623523 2076 ntBASIC14.54□□□□□ -0.08
CDH13P55290 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CDH13P55290 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CDH13P55290 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.54□□□□□ -0.08
CDH13P55290 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 BEND3P1-201ENST00000421591 1944 ntBASIC14.53□□□□□ -0.08
CDH13P55290 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH13P55290 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH13P55290 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH13P55290 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH13P55290 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH13P55290 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.53□□□□□ -0.08
CDH13P55290 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH13P55290 TMEM261P1-201ENST00000604899 340 ntBASIC14.53□□□□□ -0.08
CDH13P55290 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH13P55290 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH13P55290 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH13P55290 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 AC079781.5-202ENST00000641784 3743 ntBASIC14.53□□□□□ -0.08
CDH13P55290 MYADML-201ENST00000474610 2147 ntBASIC14.53□□□□□ -0.08
CDH13P55290 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH13P55290 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH13P55290 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH13P55290 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CDH13P55290 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH13P55290 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH13P55290 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH13P55290 FO681548.1-201ENST00000455617 1132 ntBASIC14.52□□□□□ -0.09
CDH13P55290 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.52□□□□□ -0.09
CDH13P55290 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH13P55290 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH13P55290 CLUHP6-201ENST00000580789 941 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 252.5 ms