Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 INTS4P1-203ENST00000641008 3683 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 FAM86MP-201ENST00000340703 885 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AC012441.2-201ENST00000444843 739 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 PFN1P12-201ENST00000455938 534 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 TUBB8P8-201ENST00000458717 1058 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 SORD2P-201ENST00000558556 1069 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AL023803.2-201ENST00000620080 638 ntBASIC16.13■□□□□ 0.17
NCKAP1LP55160 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.13■□□□□ 0.17
NCKAP1LP55160 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NCKAP1LP55160 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 AC092658.1-201ENST00000505836 891 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 BNIP3P13-201ENST00000599968 566 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 AC007663.3-201ENST00000609632 465 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 AL008638.5-201ENST00000623814 1298 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 AC090505.1-201ENST00000430515 1834 ntBASIC16.12■□□□□ 0.17
NCKAP1LP55160 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NCKAP1LP55160 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.12■□□□□ 0.17
NCKAP1LP55160 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NCKAP1LP55160 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NCKAP1LP55160 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms