Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 SLC25A6P2-201ENST00000497974 877 ntBASIC14.57□□□□□ -0.08
GTF2A1P52655 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AC072061.1-201ENST00000569710 2234 ntBASIC14.57□□□□□ -0.08
GTF2A1P52655 WIPI1-201ENST00000262139 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
GTF2A1P52655 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.57□□□□□ -0.08
GTF2A1P52655 AC138969.3-201ENST00000546612 1459 ntBASIC14.57□□□□□ -0.08
GTF2A1P52655 AC138932.2-201ENST00000548268 1459 ntBASIC14.57□□□□□ -0.08
GTF2A1P52655 AC126755.4-201ENST00000549796 1459 ntBASIC14.57□□□□□ -0.08
GTF2A1P52655 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
GTF2A1P52655 PCDHA6-201ENST00000378126 3267 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 AC006504.4-201ENST00000592118 1568 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SGK1-220ENST00000524929 2594 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 AL138709.1-201ENST00000614840 1693 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 PI4KAP1-204ENST00000612579 1703 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.56□□□□□ -0.08
GTF2A1P52655 PTCHD3P3-201ENST00000403073 906 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.56□□□□□ -0.08
GTF2A1P52655 PCED1CP-201ENST00000419887 785 ntBASIC14.56□□□□□ -0.08
GTF2A1P52655 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.56□□□□□ -0.08
GTF2A1P52655 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.56□□□□□ -0.08
GTF2A1P52655 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
GTF2A1P52655 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.56□□□□□ -0.08
GTF2A1P52655 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 ST3GAL6-228ENST00000613264 3399 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 PDE2A-201ENST00000334456 4315 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 HJURP-202ENST00000411486 3187 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.56□□□□□ -0.08
GTF2A1P52655 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC14.56□□□□□ -0.08
GTF2A1P52655 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
GTF2A1P52655 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
GTF2A1P52655 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
GTF2A1P52655 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.55□□□□□ -0.08
GTF2A1P52655 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
GTF2A1P52655 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.55□□□□□ -0.08
GTF2A1P52655 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.55□□□□□ -0.08
GTF2A1P52655 AC012615.1-201ENST00000565797 1299 ntBASIC14.55□□□□□ -0.08
GTF2A1P52655 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.55□□□□□ -0.08
GTF2A1P52655 AL589182.2-201ENST00000619332 1049 ntBASIC14.55□□□□□ -0.08
GTF2A1P52655 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC14.55□□□□□ -0.08
GTF2A1P52655 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
GTF2A1P52655 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms