Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB28P51157 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAB28P51157 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RAB28P51157 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB28P51157 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB28P51157 POM121L10P-201ENST00000436994 1285 ntBASIC14.27□□□□□ -0.13
RAB28P51157 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB28P51157 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB28P51157 TPT1P11-201ENST00000458482 498 ntBASIC14.27□□□□□ -0.13
RAB28P51157 AC022447.6-201ENST00000515522 438 ntBASIC14.27□□□□□ -0.13
RAB28P51157 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.27□□□□□ -0.13
RAB28P51157 AC100827.2-201ENST00000563214 1194 ntBASIC14.27□□□□□ -0.13
RAB28P51157 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC14.27□□□□□ -0.13
RAB28P51157 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.27□□□□□ -0.13
RAB28P51157 AC104982.3-201ENST00000581995 514 ntBASIC14.27□□□□□ -0.13
RAB28P51157 RN7SL219P-201ENST00000582872 296 ntBASIC14.27□□□□□ -0.13
RAB28P51157 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 AL162426.1-201ENST00000624141 743 ntBASIC14.27□□□□□ -0.13
RAB28P51157 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB28P51157 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.27□□□□□ -0.13
RAB28P51157 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RAB28P51157 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RAB28P51157 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 AC009093.10-201ENST00000641956 1442 ntBASIC14.26□□□□□ -0.13
RAB28P51157 KRT8P28-201ENST00000433288 1390 ntBASIC14.26□□□□□ -0.13
RAB28P51157 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 FAM8A2P-201ENST00000528813 1142 ntBASIC14.26□□□□□ -0.13
RAB28P51157 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 MIR4783-201ENST00000580343 82 ntBASIC14.26□□□□□ -0.13
RAB28P51157 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.26□□□□□ -0.13
RAB28P51157 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RAB28P51157 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RAB28P51157 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB28P51157 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 AC006504.5-208ENST00000588784 2401 ntBASIC14.25□□□□□ -0.13
RAB28P51157 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB28P51157 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RAB28P51157 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms