Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 AC079776.1-201ENST00000401540 1152 ntBASIC14.24□□□□□ -0.13
SLC6A12P48065 BOLA2P3-201ENST00000404566 256 ntBASIC14.24□□□□□ -0.13
SLC6A12P48065 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC14.24□□□□□ -0.13
SLC6A12P48065 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
SLC6A12P48065 AC027237.1-201ENST00000560942 655 ntBASIC14.24□□□□□ -0.13
SLC6A12P48065 AC027601.3-201ENST00000622907 509 ntBASIC14.24□□□□□ -0.13
SLC6A12P48065 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SLC6A12P48065 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC14.24□□□□□ -0.13
SLC6A12P48065 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SLC6A12P48065 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SLC6A12P48065 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SLC6A12P48065 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AC026954.1-201ENST00000429771 1293 ntBASIC14.23□□□□□ -0.13
SLC6A12P48065 U91328.1-201ENST00000437528 223 ntBASIC14.23□□□□□ -0.13
SLC6A12P48065 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AL035414.1-201ENST00000451327 857 ntBASIC14.23□□□□□ -0.13
SLC6A12P48065 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC6A12P48065 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.23□□□□□ -0.13
SLC6A12P48065 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.23□□□□□ -0.13
SLC6A12P48065 KRT17P8-201ENST00000540749 863 ntBASIC14.23□□□□□ -0.13
SLC6A12P48065 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.23□□□□□ -0.13
SLC6A12P48065 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SLC6A12P48065 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.23□□□□□ -0.13
SLC6A12P48065 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.23□□□□□ -0.13
SLC6A12P48065 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
SLC6A12P48065 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 AC064801.2-201ENST00000625052 1303 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SLC6A12P48065 TCAM1P-207ENST00000485295 1537 ntBASIC14.22□□□□□ -0.13
SLC6A12P48065 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SLC6A12P48065 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.22□□□□□ -0.13
SLC6A12P48065 SHC1P1-201ENST00000425230 1745 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms